Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 MDE1YJR024C 735 nt7.81□□□□□ -1.16
RPN11P43588 OGG1YML060W 1131 nt7.81□□□□□ -1.16
RPN11P43588 MRPL22YNL177C 930 nt7.81□□□□□ -1.16
RPN11P43588 ECM31YBR176W 939 nt7.81□□□□□ -1.16
RPN11P43588 RSC4YKR008W 1878 nt7.81□□□□□ -1.16
RPN11P43588 TUF1YOR187W 1314 nt7.8□□□□□ -1.16
RPN11P43588 MCM5YLR274W 2328 nt7.8□□□□□ -1.16
RPN11P43588 YEL034C-AYEL034C-A 603 nt7.8□□□□□ -1.16
RPN11P43588 PMT7YDR307W 1989 nt7.8□□□□□ -1.16
RPN11P43588 COR1YBL045C 1374 nt7.8□□□□□ -1.16
RPN11P43588 MRP17YKL003C 396 nt7.79□□□□□ -1.16
RPN11P43588 RPS3YNL178W 723 nt7.79□□□□□ -1.16
RPN11P43588 NPP1YCR026C 2229 nt7.79□□□□□ -1.16
RPN11P43588 CDC23YHR166C 1881 nt7.79□□□□□ -1.16
RPN11P43588 RRP45YDR280W 918 nt7.78□□□□□ -1.16
RPN11P43588 YML012C-AYML012C-A 378 nt7.78□□□□□ -1.16
RPN11P43588 OPI11YPR044C 354 nt7.78□□□□□ -1.16
RPN11P43588 PUF3YLL013C 2640 nt7.78□□□□□ -1.16
RPN11P43588 YDL129WYDL129W 876 nt7.77□□□□□ -1.17
RPN11P43588 ARG1YOL058W 1263 nt7.77□□□□□ -1.17
RPN11P43588 ATG12YBR217W 561 nt7.77□□□□□ -1.17
RPN11P43588 PXL1YKR090W 2121 nt7.76□□□□□ -1.17
RPN11P43588 ARP2YDL029W 1176 nt7.76□□□□□ -1.17
RPN11P43588 DFR1YOR236W 636 nt7.76□□□□□ -1.17
RPN11P43588 SSO1YPL232W 873 nt7.76□□□□□ -1.17
RPN11P43588 FLC2YAL053W 2352 nt7.76□□□□□ -1.17
RPN11P43588 YDL085C-AYDL085C-A 207 nt7.75□□□□□ -1.17
RPN11P43588 YNR075C-AYNR075C-A 93 nt7.75□□□□□ -1.17
RPN11P43588 LDB16YCL005W 771 nt7.75□□□□□ -1.17
RPN11P43588 AMD2YDR242W 1650 nt7.75□□□□□ -1.17
RPN11P43588 ADE13YLR359W 1449 nt7.75□□□□□ -1.17
RPN11P43588 MEH1YKR007W 555 nt7.74□□□□□ -1.17
RPN11P43588 IRC11YOR013W 471 nt7.74□□□□□ -1.17
RPN11P43588 PAC2YER007W 1557 nt7.74□□□□□ -1.17
RPN11P43588 MRK1YDL079C 1506 nt7.73□□□□□ -1.17
RPN11P43588 HSM3YBR272C 1443 nt7.73□□□□□ -1.17
RPN11P43588 ERG3YLR056W 1098 nt7.73□□□□□ -1.17
RPN11P43588 YNR042WYNR042W 429 nt7.73□□□□□ -1.17
RPN11P43588 MAL31YBR298C 1845 nt7.73□□□□□ -1.17
RPN11P43588 YFR034W-AYFR034W-A 288 nt7.72□□□□□ -1.17
RPN11P43588 MLC1YGL106W 450 nt7.72□□□□□ -1.17
RPN11P43588 YGR022CYGR022C 330 nt7.72□□□□□ -1.17
RPN11P43588 LCB3YJL134W 1230 nt7.72□□□□□ -1.17
RPN11P43588 CAR1YPL111W 1002 nt7.72□□□□□ -1.17
RPN11P43588 ALD5YER073W 1563 nt7.71□□□□□ -1.17
RPN11P43588 YMR155WYMR155W 1644 nt7.71□□□□□ -1.17
RPN11P43588 YNL042W-BYNL042W-B 258 nt7.71□□□□□ -1.18
RPN11P43588 TEA1YOR337W 2280 nt7.71□□□□□ -1.18
RPN11P43588 YDR306CYDR306C 1437 nt7.7□□□□□ -1.18
RPN11P43588 RGT2YDL138W 2292 nt7.7□□□□□ -1.18
RPN11P43588 CIN4YMR138W 576 nt7.7□□□□□ -1.18
RPN11P43588 YPL250W-AYPL250W-A 288 nt7.7□□□□□ -1.18
RPN11P43588 PRI2YKL045W 1587 nt7.7□□□□□ -1.18
RPN11P43588 RIX7YLL034C 2514 nt7.7□□□□□ -1.18
RPN11P43588 tG(GCC)BtG(GCC)B 71 nt7.69□□□□□ -1.18
RPN11P43588 SUF16tG(GCC)C 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)D1tG(GCC)D1 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)D2tG(GCC)D2 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)EtG(GCC)E 71 nt7.69□□□□□ -1.18
RPN11P43588 SUF20tG(GCC)F1 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)F2tG(GCC)F2 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)G1tG(GCC)G1 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)G2tG(GCC)G2 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)J1tG(GCC)J1 71 nt7.69□□□□□ -1.18
RPN11P43588 SUF23tG(GCC)J2 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)MtG(GCC)M 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)O1tG(GCC)O1 71 nt7.69□□□□□ -1.18
RPN11P43588 SUF17tG(GCC)O2 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)P1tG(GCC)P1 71 nt7.69□□□□□ -1.18
RPN11P43588 tG(GCC)P2tG(GCC)P2 71 nt7.69□□□□□ -1.18
RPN11P43588 YMR010WYMR010W 1218 nt7.69□□□□□ -1.18
RPN11P43588 MRPS5YBR251W 924 nt7.69□□□□□ -1.18
RPN11P43588 COX20YDR231C 618 nt7.68□□□□□ -1.18
RPN11P43588 MIA40YKL195W 1212 nt7.68□□□□□ -1.18
RPN11P43588 YNL019CYNL019C 855 nt7.68□□□□□ -1.18
RPN11P43588 YNL033WYNL033W 855 nt7.68□□□□□ -1.18
RPN11P43588 TPO3YPR156C 1869 nt7.68□□□□□ -1.18
RPN11P43588 IME2YJL106W 1938 nt7.68□□□□□ -1.18
RPN11P43588 NHA1YLR138W 2958 nt7.68□□□□□ -1.18
RPN11P43588 PRY3YJL078C 2646 nt7.67□□□□□ -1.18
RPN11P43588 HEM1YDR232W 1647 nt7.67□□□□□ -1.18
RPN11P43588 HXT9YJL219W 1704 nt7.67□□□□□ -1.18
RPN11P43588 KNH1YDL049C 807 nt7.67□□□□□ -1.18
RPN11P43588 QCR6YFR033C 444 nt7.67□□□□□ -1.18
RPN11P43588 AAD15YOL165C 432 nt7.67□□□□□ -1.18
RPN11P43588 YOR072WYOR072W 315 nt7.67□□□□□ -1.18
RPN11P43588 YCL041CYCL041C 495 nt7.67□□□□□ -1.18
RPN11P43588 MEX67YPL169C 1800 nt7.66□□□□□ -1.18
RPN11P43588 PUS7YOR243C 2031 nt7.66□□□□□ -1.18
RPN11P43588 YAL056C-AYAL056C-A 351 nt7.66□□□□□ -1.18
RPN11P43588 DCN1YLR128W 810 nt7.66□□□□□ -1.18
RPN11P43588 HXK1YFR053C 1458 nt7.66□□□□□ -1.18
RPN11P43588 ERS1YCR075C 783 nt7.65□□□□□ -1.18
RPN11P43588 MDH3YDL078C 1032 nt7.65□□□□□ -1.18
RPN11P43588 tR(ACG)JtR(ACG)J 73 nt7.65□□□□□ -1.18
RPN11P43588 YHC3YJL059W 1227 nt7.65□□□□□ -1.18
RPN11P43588 GCN3YKR026C 918 nt7.65□□□□□ -1.18
RPN11P43588 EDE1YBL047C 4146 nt7.65□□□□□ -1.18
RPN11P43588 YNL120CYNL120C 486 nt7.65□□□□□ -1.18
RPN11P43588 CAN1YEL063C 1773 nt7.64□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 129.4 ms