Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.72■■□□□ 1.07
HLA-DQA2P01906 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA2P01906 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA2P01906 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA2P01906 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA2P01906 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HLA-DQA2P01906 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA2P01906 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA2P01906 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA2P01906 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA2P01906 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA2P01906 HLA-V-202ENST00000446817 847 ntBASIC21.71■■□□□ 1.07
HLA-DQA2P01906 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA2P01906 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA2P01906 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.7■■□□□ 1.06
HLA-DQA2P01906 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQA2P01906 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQA2P01906 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQA2P01906 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA2P01906 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
HLA-DQA2P01906 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA2P01906 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.69■■□□□ 1.06
HLA-DQA2P01906 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.69■■□□□ 1.06
HLA-DQA2P01906 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA2P01906 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HLA-DQA2P01906 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA2P01906 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.68■■□□□ 1.06
HLA-DQA2P01906 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQA2P01906 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQA2P01906 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.68■■□□□ 1.06
HLA-DQA2P01906 AL359258.2-201ENST00000564063 1566 ntBASIC21.68■■□□□ 1.06
HLA-DQA2P01906 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQA2P01906 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA2P01906 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA2P01906 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA2P01906 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA2P01906 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.67■■□□□ 1.06
HLA-DQA2P01906 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA2P01906 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HLA-DQA2P01906 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQA2P01906 CR559946.2-201ENST00000623684 991 ntBASIC21.66■■□□□ 1.06
HLA-DQA2P01906 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.66■■□□□ 1.06
HLA-DQA2P01906 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQA2P01906 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQA2P01906 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.66■■□□□ 1.06
HLA-DQA2P01906 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQA2P01906 AC020928.2-201ENST00000588717 2197 ntBASIC21.65■■□□□ 1.06
HLA-DQA2P01906 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQA2P01906 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
HLA-DQA2P01906 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQA2P01906 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DQA2P01906 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DQA2P01906 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.64■■□□□ 1.05
HLA-DQA2P01906 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DQA2P01906 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
HLA-DQA2P01906 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.63■■□□□ 1.05
HLA-DQA2P01906 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA2P01906 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA2P01906 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA2P01906 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA2P01906 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA2P01906 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA2P01906 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 AC135731.1-201ENST00000569415 2548 ntBASIC21.62■■□□□ 1.05
HLA-DQA2P01906 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.62■■□□□ 1.05
HLA-DQA2P01906 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQA2P01906 ERN1-208ENST00000606895 2068 ntBASIC21.61■■□□□ 1.05
HLA-DQA2P01906 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQA2P01906 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
HLA-DQA2P01906 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 MIR3648-2-201ENST00000581792 180 ntBASIC21.6■■□□□ 1.05
HLA-DQA2P01906 MIR3648-1-201ENST00000615959 180 ntBASIC21.6■■□□□ 1.05
HLA-DQA2P01906 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQA2P01906 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA2P01906 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA2P01906 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA2P01906 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HLA-DQA2P01906 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.59■■□□□ 1.05
HLA-DQA2P01906 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA2P01906 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.58■■□□□ 1.05
HLA-DQA2P01906 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQA2P01906 AC126177.7-201ENST00000547904 679 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms