Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CGB1A6NKQ9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CGB1A6NKQ9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGB1A6NKQ9 AC020928.2-201ENST00000588717 2197 ntBASIC19.42■□□□□ 0.7
CGB1A6NKQ9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CGB1A6NKQ9 AL359258.2-201ENST00000564063 1566 ntBASIC19.42■□□□□ 0.7
CGB1A6NKQ9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.42■□□□□ 0.7
CGB1A6NKQ9 ERN1-208ENST00000606895 2068 ntBASIC19.42■□□□□ 0.7
CGB1A6NKQ9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CGB1A6NKQ9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.41■□□□□ 0.7
CGB1A6NKQ9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CGB1A6NKQ9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGB1A6NKQ9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.41■□□□□ 0.7
CGB1A6NKQ9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGB1A6NKQ9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CGB1A6NKQ9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.4■□□□□ 0.7
CGB1A6NKQ9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.39■□□□□ 0.7
CGB1A6NKQ9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 AC016575.1-201ENST00000607026 382 ntBASIC19.39■□□□□ 0.69
CGB1A6NKQ9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CGB1A6NKQ9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGB1A6NKQ9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGB1A6NKQ9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CGB1A6NKQ9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGB1A6NKQ9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.38■□□□□ 0.69
CGB1A6NKQ9 AL359504.2-201ENST00000605506 1601 ntBASIC19.38■□□□□ 0.69
CGB1A6NKQ9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CGB1A6NKQ9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CGB1A6NKQ9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.37■□□□□ 0.69
CGB1A6NKQ9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.37■□□□□ 0.69
CGB1A6NKQ9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CGB1A6NKQ9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CGB1A6NKQ9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CGB1A6NKQ9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CGB1A6NKQ9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CGB1A6NKQ9 AC010501.1-201ENST00000606270 1962 ntBASIC19.37■□□□□ 0.69
CGB1A6NKQ9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.36■□□□□ 0.69
CGB1A6NKQ9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CGB1A6NKQ9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.36■□□□□ 0.69
CGB1A6NKQ9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CGB1A6NKQ9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CGB1A6NKQ9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CGB1A6NKQ9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CGB1A6NKQ9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CGB1A6NKQ9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CGB1A6NKQ9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CGB1A6NKQ9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.35■□□□□ 0.69
CGB1A6NKQ9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CGB1A6NKQ9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CGB1A6NKQ9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CGB1A6NKQ9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CGB1A6NKQ9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CGB1A6NKQ9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CGB1A6NKQ9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CGB1A6NKQ9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CGB1A6NKQ9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CGB1A6NKQ9 AC135731.1-201ENST00000569415 2548 ntBASIC19.33■□□□□ 0.69
CGB1A6NKQ9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CGB1A6NKQ9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CGB1A6NKQ9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CGB1A6NKQ9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CGB1A6NKQ9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CGB1A6NKQ9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CGB1A6NKQ9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CGB1A6NKQ9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.32■□□□□ 0.68
CGB1A6NKQ9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CGB1A6NKQ9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CGB1A6NKQ9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CGB1A6NKQ9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CGB1A6NKQ9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.32■□□□□ 0.68
CGB1A6NKQ9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CGB1A6NKQ9 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CGB1A6NKQ9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CGB1A6NKQ9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CGB1A6NKQ9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.31■□□□□ 0.68
CGB1A6NKQ9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CGB1A6NKQ9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGB1A6NKQ9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGB1A6NKQ9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CGB1A6NKQ9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGB1A6NKQ9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CGB1A6NKQ9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms