Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.87■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Gm10420-201ENSMUST00000121713 882 ntBASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav13n-1A0A0G2JEU8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.83■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-1A0A0G2JEU8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.81■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-1A0A0G2JEU8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13n-1A0A0G2JEU8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms