Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC055876.3-201ENST00000431496 288 ntBASIC26.17■■□□□ 1.78
CDC42BPBQ9Y5S2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CDC42BPBQ9Y5S2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC26.17■■□□□ 1.78
CDC42BPBQ9Y5S2 AC138649.4-201ENST00000612222 287 ntBASIC26.17■■□□□ 1.78
CDC42BPBQ9Y5S2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CDC42BPBQ9Y5S2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 TREML5P-201ENST00000421694 576 ntBASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDC42BPBQ9Y5S2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 AC015922.1-201ENST00000421102 1152 ntBASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 BAD-207ENST00000544785 525 ntTSL 3 BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 AL139327.4-201ENST00000612362 153 ntBASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 AF228730.6-201ENST00000641497 218 ntBASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 AC084121.3-201ENST00000641716 218 ntBASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 AC105233.6-201ENST00000642093 218 ntBASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42BPBQ9Y5S2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 AC107890.1-201ENST00000422478 521 ntBASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 AL390754.1-201ENST00000619088 582 ntBASIC26.14■■□□□ 1.77
CDC42BPBQ9Y5S2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 HNRNPFP1-201ENST00000391730 1133 ntBASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 HMGA1P7-201ENST00000406908 502 ntBASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 AC005237.2-201ENST00000434368 219 ntBASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 AC125807.1-201ENST00000483097 614 ntBASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 AC012645.4-201ENST00000610691 1061 ntBASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42BPBQ9Y5S2 TUBB3P1-201ENST00000405796 1332 ntBASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 SPCS2P4-201ENST00000436160 681 ntBASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 FAM207CP-201ENST00000443486 507 ntBASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC26.12■■□□□ 1.77
CDC42BPBQ9Y5S2 MIR4515-201ENST00000584082 81 ntBASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms