Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 AC116407.4-201ENST00000623319 1061 ntBASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LINC00474Q9P2X8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 Z69720.1-201ENST00000601483 472 ntBASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC11.46□□□□□ -0.57
LINC00474Q9P2X8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 NOC2LP2-201ENST00000407594 1944 ntBASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 AC092850.2-201ENST00000623821 2697 ntBASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 AC099343.3-201ENST00000605834 2503 ntBASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC00474Q9P2X8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 TBC1D3P5-201ENST00000579401 1545 ntBASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00474Q9P2X8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms