Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.05■□□□□ 0.96
SALL1Q9NSC2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 AC012317.2-201ENST00000623305 2251 ntBASIC21.04■□□□□ 0.96
SALL1Q9NSC2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 AP002414.1-201ENST00000391405 1147 ntBASIC21.04■□□□□ 0.96
SALL1Q9NSC2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SALL1Q9NSC2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 RPSAP43-201ENST00000402237 625 ntBASIC21.03■□□□□ 0.96
SALL1Q9NSC2 UPF3AP3-201ENST00000420996 769 ntBASIC21.03■□□□□ 0.96
SALL1Q9NSC2 GPX1P2-201ENST00000429271 606 ntBASIC21.03■□□□□ 0.96
SALL1Q9NSC2 KRT18P2-201ENST00000447938 1258 ntBASIC21.03■□□□□ 0.96
SALL1Q9NSC2 HCG4B-203ENST00000450128 991 ntBASIC21.03■□□□□ 0.96
SALL1Q9NSC2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.03■□□□□ 0.96
SALL1Q9NSC2 AC002347.1-201ENST00000569543 541 ntBASIC21.03■□□□□ 0.96
SALL1Q9NSC2 LINC01451-201ENST00000623792 534 ntBASIC21.03■□□□□ 0.96
SALL1Q9NSC2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.02■□□□□ 0.96
SALL1Q9NSC2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
SALL1Q9NSC2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.95
SALL1Q9NSC2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.02■□□□□ 0.95
SALL1Q9NSC2 PTCHD3P3-201ENST00000403073 906 ntBASIC21.02■□□□□ 0.95
SALL1Q9NSC2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SALL1Q9NSC2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SALL1Q9NSC2 VN2R19P-201ENST00000442399 1052 ntBASIC21.02■□□□□ 0.95
SALL1Q9NSC2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.02■□□□□ 0.95
SALL1Q9NSC2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.02■□□□□ 0.95
SALL1Q9NSC2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.02■□□□□ 0.95
SALL1Q9NSC2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms