Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 AC074051.2-201ENST00000565115 352 ntBASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 MIR3652-201ENST00000579335 131 ntBASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 CLEC4GP1-201ENST00000596555 870 ntBASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 Z69720.1-201ENST00000601483 472 ntBASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 AC012313.10-201ENST00000623509 926 ntBASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NECTIN3Q9NQS3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 NKILA-202ENST00000614771 2598 ntBASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 IGHV3-47-201ENST00000425060 335 ntBASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 AC246785.2-201ENST00000432512 513 ntBASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 VENTXP7-201ENST00000475503 772 ntBASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 AC104819.1-201ENST00000504587 486 ntBASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 AC012615.1-201ENST00000565797 1299 ntBASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 AC005336.2-201ENST00000593183 939 ntBASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 AL118508.1-201ENST00000613502 2345 ntBASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.82■□□□□ 0.28
NECTIN3Q9NQS3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NECTIN3Q9NQS3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.8■□□□□ 0.28
NECTIN3Q9NQS3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms