Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 PMPCAP1-201ENST00000508114 1576 ntBASIC17.68■□□□□ 0.42
PHOX2BQ99453 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 AC096734.2-201ENST00000562054 433 ntBASIC17.68■□□□□ 0.42
PHOX2BQ99453 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 AC008667.4-201ENST00000607370 168 ntBASIC17.68■□□□□ 0.42
PHOX2BQ99453 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 AC073592.4-201ENST00000623827 446 ntBASIC17.68■□□□□ 0.42
PHOX2BQ99453 AC009093.7-201ENST00000623853 1223 ntBASIC17.68■□□□□ 0.42
PHOX2BQ99453 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 AC090340.1-201ENST00000620778 4980 ntBASIC17.68■□□□□ 0.42
PHOX2BQ99453 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 AL121761.2-201ENST00000598007 1648 ntBASIC17.68■□□□□ 0.42
PHOX2BQ99453 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.68■□□□□ 0.42
PHOX2BQ99453 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHOX2BQ99453 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 PRYP5-201ENST00000451909 266 ntBASIC17.67■□□□□ 0.42
PHOX2BQ99453 RPS15P9-201ENST00000494093 319 ntBASIC17.67■□□□□ 0.42
PHOX2BQ99453 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 AL662799.1-202ENST00000614205 422 ntBASIC17.67■□□□□ 0.42
PHOX2BQ99453 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHOX2BQ99453 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.67■□□□□ 0.42
PHOX2BQ99453 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 AL627223.1-201ENST00000416693 442 ntBASIC17.66■□□□□ 0.42
PHOX2BQ99453 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 HILS1-202ENST00000545329 423 ntBASIC17.66■□□□□ 0.42
PHOX2BQ99453 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 AC027307.3-201ENST00000594262 1100 ntBASIC17.66■□□□□ 0.42
PHOX2BQ99453 AL390754.1-201ENST00000619088 582 ntBASIC17.66■□□□□ 0.42
PHOX2BQ99453 REXO1L3P-201ENST00000622202 1288 ntBASIC17.66■□□□□ 0.42
PHOX2BQ99453 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHOX2BQ99453 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PHOX2BQ99453 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms