Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE4Q96A23 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE4Q96A23 SIRPAP1-201ENST00000448467 1770 ntBASIC15.76■□□□□ 0.11
CPNE4Q96A23 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE4Q96A23 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CPNE4Q96A23 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE4Q96A23 AL353593.2-201ENST00000602529 1483 ntBASIC15.76■□□□□ 0.11
CPNE4Q96A23 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CPNE4Q96A23 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE4Q96A23 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE4Q96A23 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE4Q96A23 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE4Q96A23 AP005117.1-201ENST00000584346 1413 ntBASIC15.76■□□□□ 0.11
CPNE4Q96A23 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE4Q96A23 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 AKR1C7P-201ENST00000305623 895 ntBASIC15.75■□□□□ 0.11
CPNE4Q96A23 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 AC008608.2-201ENST00000606089 416 ntBASIC15.75■□□□□ 0.11
CPNE4Q96A23 AP001269.4-201ENST00000609611 512 ntBASIC15.75■□□□□ 0.11
CPNE4Q96A23 AP000867.4-201ENST00000641616 219 ntBASIC15.75■□□□□ 0.11
CPNE4Q96A23 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.75■□□□□ 0.11
CPNE4Q96A23 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CPNE4Q96A23 AL049757.1-201ENST00000616842 1596 ntBASIC15.75■□□□□ 0.11
CPNE4Q96A23 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 EMBP1-201ENST00000458200 901 ntBASIC15.74■□□□□ 0.11
CPNE4Q96A23 SCARNA2-201ENST00000458748 420 ntBASIC15.74■□□□□ 0.11
CPNE4Q96A23 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 AC109462.3-201ENST00000573934 613 ntBASIC15.74■□□□□ 0.11
CPNE4Q96A23 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 AC019129.2-201ENST00000609837 1235 ntBASIC15.74■□□□□ 0.11
CPNE4Q96A23 AL355877.3-201ENST00000622820 899 ntBASIC15.74■□□□□ 0.11
CPNE4Q96A23 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 PMPCAP1-201ENST00000508114 1576 ntBASIC15.74■□□□□ 0.11
CPNE4Q96A23 AC012317.2-201ENST00000623305 2251 ntBASIC15.74■□□□□ 0.11
CPNE4Q96A23 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CPNE4Q96A23 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.74■□□□□ 0.11
CPNE4Q96A23 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms