Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AC022145.2-201ENST00000598203 171 ntBASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 AC132938.6-201ENST00000623828 1655 ntBASIC16.5■□□□□ 0.23
SNIP1Q8TAD8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 OR7E47P-204ENST00000575924 449 ntBASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 AL353135.1-201ENST00000606729 504 ntBASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNIP1Q8TAD8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AC026471.1-201ENST00000564629 3026 ntBASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AC093484.2-201ENST00000580996 2166 ntBASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AC015922.1-201ENST00000421102 1152 ntBASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AC087641.1-201ENST00000557561 1021 ntBASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AC068137.2-201ENST00000605408 478 ntBASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 AC004408.2-201ENST00000623613 2777 ntBASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SNIP1Q8TAD8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms