Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 TP53TG3HP-202ENST00000569755 579 ntBASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 AC007967.4-201ENST00000614700 386 ntBASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 AC004840.1-201ENST00000636359 365 ntBASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 AL031598.1-201ENST00000561511 1773 ntBASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 AC046185.3-201ENST00000623228 1824 ntBASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC23.09■■□□□ 1.29
COL22A1Q8NFW1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 MIR346-201ENST00000362234 95 ntBASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 AC245100.3-201ENST00000441281 285 ntBASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 AC027369.6-201ENST00000525520 931 ntBASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 API5-211ENST00000534695 560 ntTSL 5 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL22A1Q8NFW1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 RPS2P32-201ENST00000439199 892 ntBASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL22A1Q8NFW1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 AC027307.2-201ENST00000591252 911 ntBASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL22A1Q8NFW1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 HNRNPRP1-201ENST00000453465 1695 ntBASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 AC073130.3-201ENST00000624389 2278 ntBASIC23.06■■□□□ 1.28
COL22A1Q8NFW1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 HNRNPA3P5-201ENST00000455201 833 ntBASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 AL031055.1-201ENST00000606362 631 ntBASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 AL844908.2-201ENST00000609461 460 ntBASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.05■■□□□ 1.28
COL22A1Q8NFW1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms