Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 AL162727.3-201ENST00000635661 2787 ntBASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 AC096633.1-201ENST00000422446 749 ntBASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 AC007967.3-201ENST00000434308 558 ntBASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 KRT18P56-201ENST00000507275 550 ntBASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIMC1Q8NDZ2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 AP000867.3-201ENST00000524675 377 ntBASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 AC116407.2-201ENST00000613639 860 ntBASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIMC1Q8NDZ2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 IGHV3-47-201ENST00000425060 335 ntBASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 DDX43P3-201ENST00000441064 443 ntBASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIMC1Q8NDZ2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.52■□□□□ 0.23
SIMC1Q8NDZ2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms