Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC17A8Q8NDX2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
SLC17A8Q8NDX2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 GAPDHP21-201ENST00000450301 1010 ntBASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 YBX1P5-201ENST00000509441 847 ntBASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SLC17A8Q8NDX2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AC096633.1-201ENST00000422446 749 ntBASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AP001269.4-201ENST00000609611 512 ntBASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AC093512.1-201ENST00000617969 520 ntBASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 LTB4R2-202ENST00000528054 3092 ntBASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 KRT8P47-201ENST00000604727 1398 ntBASIC19.69■□□□□ 0.74
SLC17A8Q8NDX2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 OR8S1-201ENST00000310194 1080 ntBASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 AP005901.3-202ENST00000581653 237 ntBASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 AC093028.1-201ENST00000622998 982 ntBASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC17A8Q8NDX2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms