Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 KRT18P13-201ENST00000400056 1290 ntBASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 AC092865.5-201ENST00000545435 363 ntBASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 AL139327.4-201ENST00000612362 153 ntBASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 AL135999.2-201ENST00000622438 1686 ntBASIC21.79■■□□□ 1.08
UBE3BQ7Z3V4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 AC008667.4-201ENST00000607370 168 ntBASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UBE3BQ7Z3V4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 PTCHD3P3-201ENST00000403073 906 ntBASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 SLC25A6P5-201ENST00000435663 894 ntBASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 IGHV3-65-201ENST00000523210 341 ntBASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 GPALPP1-207ENST00000611650 899 ntBASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 AL805961.1-202ENST00000641562 540 ntBASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 NOC2LP1-202ENST00000452600 2235 ntBASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
UBE3BQ7Z3V4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 BX842568.4-201ENST00000421222 227 ntBASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 AC064836.3-201ENST00000607928 673 ntBASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 AC008764.6-201ENST00000595909 2069 ntBASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.76■■□□□ 1.07
UBE3BQ7Z3V4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms