Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 AC002056.1-201ENST00000395613 760 ntBASIC21.95■■□□□ 1.1
SMIM5Q71RC9 BASP1P1-201ENST00000430708 665 ntBASIC21.95■■□□□ 1.1
SMIM5Q71RC9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 LINC02560-201ENST00000596379 459 ntBASIC21.95■■□□□ 1.1
SMIM5Q71RC9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SMIM5Q71RC9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 KRT18P32-201ENST00000424695 1287 ntBASIC21.94■■□□□ 1.1
SMIM5Q71RC9 RBPMS2P1-201ENST00000437762 623 ntBASIC21.94■■□□□ 1.1
SMIM5Q71RC9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 AC087163.2-201ENST00000457299 853 ntBASIC21.94■■□□□ 1.1
SMIM5Q71RC9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 AC067863.1-201ENST00000494933 530 ntBASIC21.94■■□□□ 1.1
SMIM5Q71RC9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 AL390754.1-201ENST00000619088 582 ntBASIC21.94■■□□□ 1.1
SMIM5Q71RC9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SMIM5Q71RC9 AL135999.2-201ENST00000622438 1686 ntBASIC21.94■■□□□ 1.1
SMIM5Q71RC9 REXO1L9P-201ENST00000604264 2108 ntBASIC21.94■■□□□ 1.1
SMIM5Q71RC9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 SLC25A39P2-201ENST00000537614 270 ntBASIC21.93■■□□□ 1.1
SMIM5Q71RC9 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SMIM5Q71RC9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 AIRN-201ENST00000601203 4374 ntBASIC21.92■■□□□ 1.1
SMIM5Q71RC9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 ACTG1P4-201ENST00000425123 1122 ntBASIC21.92■■□□□ 1.1
SMIM5Q71RC9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC21.92■■□□□ 1.1
SMIM5Q71RC9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.92■■□□□ 1.1
SMIM5Q71RC9 SPCS2P4-201ENST00000436160 681 ntBASIC21.92■■□□□ 1.1
SMIM5Q71RC9 CNN2P2-201ENST00000443536 909 ntBASIC21.92■■□□□ 1.1
SMIM5Q71RC9 CNN2P3-201ENST00000450201 906 ntBASIC21.92■■□□□ 1.1
SMIM5Q71RC9 KLF2P3-201ENST00000451977 1087 ntBASIC21.92■■□□□ 1.1
SMIM5Q71RC9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms