Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 AL596275.1-201ENST00000423464 877 ntBASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 NEK4P2-201ENST00000580004 1012 ntBASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 AC009949.1-201ENST00000623048 1830 ntBASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCHD4Q6ZW05 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 AL512604.3-201ENST00000569583 964 ntBASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
PTCHD4Q6ZW05 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
PTCHD4Q6ZW05 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.14■□□□□ 0.18
PTCHD4Q6ZW05 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PTCHD4Q6ZW05 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
PTCHD4Q6ZW05 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 ECEL1P3-201ENST00000427961 737 ntBASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 AC008687.5-201ENST00000593746 558 ntBASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 AL157888.1-201ENST00000631930 593 ntBASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 AC092865.7-201ENST00000641832 219 ntBASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PTCHD4Q6ZW05 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 LINC01568-207ENST00000641790 1380 ntBASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.13■□□□□ 0.17
PTCHD4Q6ZW05 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms