Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 AC011840.4-201ENST00000578471 627 ntBASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.77■□□□□ 0.12
NHLRC1Q6VVB1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 AL138688.1-201ENST00000624851 1594 ntBASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
NHLRC1Q6VVB1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 AC233702.3-201ENST00000578656 1387 ntBASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 ARMC10P1-201ENST00000313754 855 ntBASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NHLRC1Q6VVB1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 IGHV3-47-201ENST00000425060 335 ntBASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 AC122714.2-201ENST00000502787 707 ntBASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 AC019129.2-201ENST00000609837 1235 ntBASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 AC091076.1-201ENST00000610741 619 ntBASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NHLRC1Q6VVB1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms