Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 AP002469.2-201ENST00000531724 424 ntBASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 TP73-AS1-207ENST00000624167 988 ntBASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 KRT8P10-201ENST00000450021 1447 ntBASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.29■□□□□ 0.52
RFWD3Q6PCD5 KRT18P55-202ENST00000578578 1546 ntBASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 HCG11-201ENST00000411553 5696 ntBASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 ABCD1P5-201ENST00000445663 754 ntBASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 MTDHP3-201ENST00000594186 672 ntBASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFWD3Q6PCD5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AP005117.1-201ENST00000584346 1413 ntBASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AC012317.2-201ENST00000623305 2251 ntBASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 COX5BP2-201ENST00000392354 334 ntBASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 FDX1P1-201ENST00000449115 551 ntBASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AC106795.1-205ENST00000512851 1056 ntBASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AC116407.2-201ENST00000613639 860 ntBASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 AL355877.3-201ENST00000622820 899 ntBASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFWD3Q6PCD5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms