Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 KLF2P3-201ENST00000451977 1087 ntBASIC21.87■■□□□ 1.09
RC3H1Q5TC82 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 DUX4L17-201ENST00000557360 1267 ntBASIC21.87■■□□□ 1.09
RC3H1Q5TC82 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.87■■□□□ 1.09
RC3H1Q5TC82 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 MIR943-201ENST00000401286 94 ntBASIC21.86■■□□□ 1.09
RC3H1Q5TC82 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 SPCS2P4-201ENST00000436160 681 ntBASIC21.86■■□□□ 1.09
RC3H1Q5TC82 TSPY16P-201ENST00000449843 468 ntBASIC21.86■■□□□ 1.09
RC3H1Q5TC82 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 AL035252.4-201ENST00000624174 288 ntBASIC21.86■■□□□ 1.09
RC3H1Q5TC82 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.86■■□□□ 1.09
RC3H1Q5TC82 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 AC236430.1-201ENST00000402231 743 ntBASIC21.85■■□□□ 1.09
RC3H1Q5TC82 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 AL161645.1-201ENST00000622716 1255 ntBASIC21.85■■□□□ 1.09
RC3H1Q5TC82 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 REXO1L9P-201ENST00000604264 2108 ntBASIC21.85■■□□□ 1.09
RC3H1Q5TC82 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RC3H1Q5TC82 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 REXO1L11P-201ENST00000620964 1927 ntBASIC21.84■■□□□ 1.09
RC3H1Q5TC82 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 AC107890.1-201ENST00000422478 521 ntBASIC21.84■■□□□ 1.09
RC3H1Q5TC82 AC005034.1-201ENST00000426657 489 ntBASIC21.84■■□□□ 1.09
RC3H1Q5TC82 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 TERF1P3-201ENST00000505638 1227 ntBASIC21.84■■□□□ 1.09
RC3H1Q5TC82 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 KRT8P23-201ENST00000560090 1207 ntBASIC21.84■■□□□ 1.09
RC3H1Q5TC82 AC140878.1-201ENST00000565277 250 ntBASIC21.84■■□□□ 1.09
RC3H1Q5TC82 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.84■■□□□ 1.09
RC3H1Q5TC82 AL139327.4-201ENST00000612362 153 ntBASIC21.84■■□□□ 1.09
RC3H1Q5TC82 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RC3H1Q5TC82 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RC3H1Q5TC82 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.83■■□□□ 1.09
RC3H1Q5TC82 WIZP1-201ENST00000531444 2299 ntBASIC21.83■■□□□ 1.09
RC3H1Q5TC82 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms