Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 AC138894.3-201ENST00000603787 634 ntBASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 PP12613-201ENST00000424958 2230 ntBASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 CROCCP2-202ENST00000412962 2773 ntBASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.66■□□□□ 0.26
TMEM35AQ53FP2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 AC141586.5-201ENST00000624546 2050 ntBASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 STK19B-204ENST00000512515 211 ntBASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 AL121772.3-201ENST00000610840 674 ntBASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 AC073592.5-201ENST00000624854 528 ntBASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TMEM35AQ53FP2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TMEM35AQ53FP2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
TMEM35AQ53FP2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 AC009336.1-201ENST00000608941 1553 ntBASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 AC132938.5-201ENST00000624980 1813 ntBASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 KLF4P1-201ENST00000412782 1185 ntBASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 ABCD1P5-201ENST00000445663 754 ntBASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 FOSL1P1-201ENST00000511041 816 ntBASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 AP000867.4-201ENST00000641616 219 ntBASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms