Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H1AQ02539 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST1H1AQ02539 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H1AQ02539 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H1AQ02539 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST1H1AQ02539 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST1H1AQ02539 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 AC087499.1-201ENST00000418141 1075 ntBASIC13.46□□□□□ -0.25
HIST1H1AQ02539 PVRIG2P-201ENST00000435460 978 ntBASIC13.46□□□□□ -0.25
HIST1H1AQ02539 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 AL023973.1-201ENST00000624619 620 ntBASIC13.46□□□□□ -0.25
HIST1H1AQ02539 AC066615.1-201ENST00000640911 628 ntBASIC13.46□□□□□ -0.25
HIST1H1AQ02539 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HIST1H1AQ02539 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 AC132938.6-201ENST00000623828 1655 ntBASIC13.46□□□□□ -0.26
HIST1H1AQ02539 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 LINC00602-201ENST00000629776 2065 ntBASIC13.46□□□□□ -0.26
HIST1H1AQ02539 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST1H1AQ02539 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 GCSHP2-201ENST00000560971 527 ntBASIC13.45□□□□□ -0.26
HIST1H1AQ02539 AC145285.6-201ENST00000604632 637 ntBASIC13.45□□□□□ -0.26
HIST1H1AQ02539 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST1H1AQ02539 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms