Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.46■□□□□ 0.07
NKX6-1P78426 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.46■□□□□ 0.07
NKX6-1P78426 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX6-1P78426 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.46■□□□□ 0.07
NKX6-1P78426 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.46■□□□□ 0.07
NKX6-1P78426 AC005336.2-201ENST00000593183 939 ntBASIC15.46■□□□□ 0.07
NKX6-1P78426 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX6-1P78426 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.46■□□□□ 0.07
NKX6-1P78426 AC114341.1-201ENST00000618070 349 ntBASIC15.46■□□□□ 0.07
NKX6-1P78426 AL691403.2-201ENST00000618460 490 ntBASIC15.46■□□□□ 0.07
NKX6-1P78426 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NKX6-1P78426 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NKX6-1P78426 AC139713.2-201ENST00000641328 2723 ntBASIC15.46■□□□□ 0.07
NKX6-1P78426 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX6-1P78426 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.46■□□□□ 0.07
NKX6-1P78426 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 AC009113.1-201ENST00000570267 2443 ntBASIC15.46■□□□□ 0.07
NKX6-1P78426 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
NKX6-1P78426 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NKX6-1P78426 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NKX6-1P78426 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.46■□□□□ 0.06
NKX6-1P78426 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NKX6-1P78426 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
NKX6-1P78426 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
NKX6-1P78426 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
NKX6-1P78426 AC135050.7-201ENST00000624508 2218 ntBASIC15.45■□□□□ 0.06
NKX6-1P78426 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
NKX6-1P78426 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 AC018712.1-201ENST00000455767 687 ntBASIC15.45■□□□□ 0.06
NKX6-1P78426 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.45■□□□□ 0.06
NKX6-1P78426 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.45■□□□□ 0.06
NKX6-1P78426 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.45■□□□□ 0.06
NKX6-1P78426 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NKX6-1P78426 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NKX6-1P78426 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NKX6-1P78426 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.44■□□□□ 0.06
NKX6-1P78426 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.44■□□□□ 0.06
NKX6-1P78426 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.44■□□□□ 0.06
NKX6-1P78426 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.44■□□□□ 0.06
NKX6-1P78426 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NKX6-1P78426 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NKX6-1P78426 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms