Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EMP3P54852 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EMP3P54852 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EMP3P54852 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
EMP3P54852 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
EMP3P54852 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.07■□□□□ 0.32
EMP3P54852 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 POM121L3P-201ENST00000419331 1163 ntBASIC17.07■□□□□ 0.32
EMP3P54852 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC17.07■□□□□ 0.32
EMP3P54852 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.07■□□□□ 0.32
EMP3P54852 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.07■□□□□ 0.32
EMP3P54852 AC112698.1-201ENST00000510299 916 ntBASIC17.07■□□□□ 0.32
EMP3P54852 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 AL353729.2-201ENST00000605859 1249 ntBASIC17.07■□□□□ 0.32
EMP3P54852 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
EMP3P54852 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
EMP3P54852 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EMP3P54852 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.07■□□□□ 0.32
EMP3P54852 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
EMP3P54852 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EMP3P54852 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.06■□□□□ 0.32
EMP3P54852 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.06■□□□□ 0.32
EMP3P54852 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
EMP3P54852 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EMP3P54852 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EMP3P54852 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
EMP3P54852 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 DUSP5P1-201ENST00000441325 1139 ntBASIC17.06■□□□□ 0.32
EMP3P54852 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
EMP3P54852 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.06■□□□□ 0.32
EMP3P54852 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC17.06■□□□□ 0.32
EMP3P54852 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.06■□□□□ 0.32
EMP3P54852 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.06■□□□□ 0.32
EMP3P54852 AC074051.2-201ENST00000565115 352 ntBASIC17.06■□□□□ 0.32
EMP3P54852 PRELID1P1-202ENST00000567272 903 ntBASIC17.06■□□□□ 0.32
EMP3P54852 ADAM3B-201ENST00000569937 840 ntBASIC17.06■□□□□ 0.32
EMP3P54852 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.06■□□□□ 0.32
EMP3P54852 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.06■□□□□ 0.32
EMP3P54852 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.06■□□□□ 0.32
EMP3P54852 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.06■□□□□ 0.32
EMP3P54852 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
EMP3P54852 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
EMP3P54852 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
EMP3P54852 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
EMP3P54852 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EMP3P54852 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.05■□□□□ 0.32
EMP3P54852 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EMP3P54852 PP12613-201ENST00000424958 2230 ntBASIC17.05■□□□□ 0.32
EMP3P54852 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.05■□□□□ 0.32
EMP3P54852 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EMP3P54852 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.05■□□□□ 0.32
EMP3P54852 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EMP3P54852 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
EMP3P54852 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
EMP3P54852 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.05■□□□□ 0.32
EMP3P54852 AC097374.2-201ENST00000618617 1306 ntBASIC17.05■□□□□ 0.32
EMP3P54852 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
EMP3P54852 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms