Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COPAP53621 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.1■□□□□ 0.49
COPAP53621 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.1■□□□□ 0.49
COPAP53621 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.1■□□□□ 0.49
COPAP53621 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
COPAP53621 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.1■□□□□ 0.49
COPAP53621 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 AC132938.6-201ENST00000623828 1655 ntBASIC18.09■□□□□ 0.49
COPAP53621 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.09■□□□□ 0.49
COPAP53621 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.09■□□□□ 0.49
COPAP53621 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.09■□□□□ 0.49
COPAP53621 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.09■□□□□ 0.49
COPAP53621 AC012317.2-201ENST00000623305 2251 ntBASIC18.09■□□□□ 0.49
COPAP53621 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
COPAP53621 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.09■□□□□ 0.49
COPAP53621 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.09■□□□□ 0.49
COPAP53621 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.09■□□□□ 0.49
COPAP53621 RNPS1P1-201ENST00000507437 918 ntBASIC18.09■□□□□ 0.49
COPAP53621 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.09■□□□□ 0.49
COPAP53621 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 AC023511.2-201ENST00000618803 211 ntBASIC18.09■□□□□ 0.49
COPAP53621 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.09■□□□□ 0.49
COPAP53621 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COPAP53621 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COPAP53621 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
COPAP53621 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
COPAP53621 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.09■□□□□ 0.49
COPAP53621 AC093677.2-201ENST00000600169 1863 ntBASIC18.09■□□□□ 0.49
COPAP53621 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
COPAP53621 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COPAP53621 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
COPAP53621 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.09■□□□□ 0.49
COPAP53621 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COPAP53621 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPAP53621 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPAP53621 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPAP53621 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.08■□□□□ 0.49
COPAP53621 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPAP53621 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
COPAP53621 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COPAP53621 AC243591.1-201ENST00000452967 1364 ntBASIC18.08■□□□□ 0.49
COPAP53621 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.08■□□□□ 0.49
COPAP53621 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COPAP53621 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPAP53621 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.08■□□□□ 0.48
COPAP53621 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.08■□□□□ 0.48
COPAP53621 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COPAP53621 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.08■□□□□ 0.48
COPAP53621 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.08■□□□□ 0.48
COPAP53621 SLC25A1P1-201ENST00000528351 927 ntBASIC18.08■□□□□ 0.48
COPAP53621 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.08■□□□□ 0.48
COPAP53621 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.08■□□□□ 0.48
COPAP53621 AL049840.3-201ENST00000602669 611 ntBASIC18.08■□□□□ 0.48
COPAP53621 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.08■□□□□ 0.48
COPAP53621 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.08■□□□□ 0.48
COPAP53621 MIR7706-201ENST00000613747 67 ntBASIC18.08■□□□□ 0.48
COPAP53621 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.08■□□□□ 0.48
COPAP53621 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.08■□□□□ 0.48
COPAP53621 AF228730.7-201ENST00000641842 219 ntBASIC18.08■□□□□ 0.48
COPAP53621 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.08■□□□□ 0.48
COPAP53621 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPAP53621 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.08■□□□□ 0.48
COPAP53621 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
COPAP53621 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPAP53621 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPAP53621 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.08■□□□□ 0.48
COPAP53621 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPAP53621 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.08■□□□□ 0.48
COPAP53621 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPAP53621 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COPAP53621 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COPAP53621 AP005117.1-201ENST00000584346 1413 ntBASIC18.07■□□□□ 0.48
COPAP53621 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPAP53621 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.07■□□□□ 0.48
COPAP53621 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.07■□□□□ 0.48
COPAP53621 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.07■□□□□ 0.48
COPAP53621 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPAP53621 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPAP53621 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.07■□□□□ 0.48
COPAP53621 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPAP53621 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPAP53621 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.07■□□□□ 0.48
COPAP53621 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPAP53621 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COPAP53621 HNRNPDP1-201ENST00000439535 754 ntBASIC18.07■□□□□ 0.48
COPAP53621 ABCD1P5-201ENST00000445663 754 ntBASIC18.07■□□□□ 0.48
COPAP53621 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COPAP53621 AC073648.2-201ENST00000510116 352 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms