Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.21■□□□□ 0.35
GTF2A1P52655 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2A1P52655 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.21■□□□□ 0.35
GTF2A1P52655 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
GTF2A1P52655 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2A1P52655 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.21■□□□□ 0.35
GTF2A1P52655 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.21■□□□□ 0.35
GTF2A1P52655 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.21■□□□□ 0.35
GTF2A1P52655 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2A1P52655 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2A1P52655 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2A1P52655 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GTF2A1P52655 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.21■□□□□ 0.35
GTF2A1P52655 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.21■□□□□ 0.35
GTF2A1P52655 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.21■□□□□ 0.35
GTF2A1P52655 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
GTF2A1P52655 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GTF2A1P52655 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GTF2A1P52655 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.21■□□□□ 0.34
GTF2A1P52655 AC068338.2-201ENST00000563278 1430 ntBASIC17.21■□□□□ 0.34
GTF2A1P52655 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GTF2A1P52655 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.21■□□□□ 0.34
GTF2A1P52655 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GTF2A1P52655 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.2■□□□□ 0.34
GTF2A1P52655 AC018553.1-201ENST00000616682 1458 ntBASIC17.2■□□□□ 0.34
GTF2A1P52655 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.2■□□□□ 0.34
GTF2A1P52655 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
GTF2A1P52655 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.2■□□□□ 0.34
GTF2A1P52655 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.2■□□□□ 0.34
GTF2A1P52655 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
GTF2A1P52655 NTF6G-201ENST00000591094 616 ntBASIC17.2■□□□□ 0.34
GTF2A1P52655 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.2■□□□□ 0.34
GTF2A1P52655 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.2■□□□□ 0.34
GTF2A1P52655 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GTF2A1P52655 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.2■□□□□ 0.34
GTF2A1P52655 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GTF2A1P52655 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.2■□□□□ 0.34
GTF2A1P52655 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.2■□□□□ 0.34
GTF2A1P52655 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.2■□□□□ 0.34
GTF2A1P52655 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.2■□□□□ 0.34
GTF2A1P52655 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.19■□□□□ 0.34
GTF2A1P52655 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.19■□□□□ 0.34
GTF2A1P52655 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GTF2A1P52655 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GTF2A1P52655 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GTF2A1P52655 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GTF2A1P52655 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
GTF2A1P52655 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GTF2A1P52655 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.19■□□□□ 0.34
GTF2A1P52655 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.19■□□□□ 0.34
GTF2A1P52655 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GTF2A1P52655 AC023632.3-201ENST00000521633 145 ntBASIC17.19■□□□□ 0.34
GTF2A1P52655 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GTF2A1P52655 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.19■□□□□ 0.34
GTF2A1P52655 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.19■□□□□ 0.34
GTF2A1P52655 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.19■□□□□ 0.34
GTF2A1P52655 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 CYP2T3P-201ENST00000601990 817 ntBASIC17.19■□□□□ 0.34
GTF2A1P52655 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GTF2A1P52655 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
GTF2A1P52655 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms