Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCNKAP51800 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCNKAP51800 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCNKAP51800 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCNKAP51800 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCNKAP51800 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCNKAP51800 REXO1L11P-201ENST00000620964 1927 ntBASIC17.19■□□□□ 0.34
CLCNKAP51800 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 AC132938.5-201ENST00000624980 1813 ntBASIC17.19■□□□□ 0.34
CLCNKAP51800 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCNKAP51800 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCNKAP51800 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCNKAP51800 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCNKAP51800 AL020989.1-201ENST00000422979 469 ntBASIC17.19■□□□□ 0.34
CLCNKAP51800 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCNKAP51800 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLCNKAP51800 AC025062.2-201ENST00000605477 670 ntBASIC17.19■□□□□ 0.34
CLCNKAP51800 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCNKAP51800 AC148477.8-201ENST00000624298 468 ntBASIC17.19■□□□□ 0.34
CLCNKAP51800 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCNKAP51800 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.19■□□□□ 0.34
CLCNKAP51800 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLCNKAP51800 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCNKAP51800 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCNKAP51800 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 FAM215A-202ENST00000632077 792 ntBASIC17.18■□□□□ 0.34
CLCNKAP51800 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLCNKAP51800 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLCNKAP51800 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCNKAP51800 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCNKAP51800 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCNKAP51800 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCNKAP51800 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCNKAP51800 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCNKAP51800 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.17■□□□□ 0.34
CLCNKAP51800 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCNKAP51800 HNRNPDP1-201ENST00000439535 754 ntBASIC17.17■□□□□ 0.34
CLCNKAP51800 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCNKAP51800 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.17■□□□□ 0.34
CLCNKAP51800 AC093909.1-201ENST00000504731 1122 ntBASIC17.17■□□□□ 0.34
CLCNKAP51800 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.17■□□□□ 0.34
CLCNKAP51800 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms