Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.11■□□□□ 0.17
SLC9A3P48764 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 STARP1-201ENST00000397973 869 ntBASIC16.11■□□□□ 0.17
SLC9A3P48764 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC9A3P48764 HLA-F-220ENST00000434407 884 ntBASIC16.11■□□□□ 0.17
SLC9A3P48764 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 AC079602.3-201ENST00000623931 403 ntBASIC16.11■□□□□ 0.17
SLC9A3P48764 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
SLC9A3P48764 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC9A3P48764 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC9A3P48764 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC9A3P48764 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC9A3P48764 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.11■□□□□ 0.17
SLC9A3P48764 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC9A3P48764 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC9A3P48764 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.1■□□□□ 0.17
SLC9A3P48764 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC9A3P48764 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC9A3P48764 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC9A3P48764 AL441883.1-201ENST00000566170 1045 ntBASIC16.1■□□□□ 0.17
SLC9A3P48764 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC9A3P48764 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC9A3P48764 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC9A3P48764 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SLC9A3P48764 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC9A3P48764 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 KRT8P47-201ENST00000604727 1398 ntBASIC16.1■□□□□ 0.17
SLC9A3P48764 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC9A3P48764 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC9A3P48764 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC9A3P48764 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC9A3P48764 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC9A3P48764 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC9A3P48764 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.09■□□□□ 0.17
SLC9A3P48764 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC9A3P48764 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC9A3P48764 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC9A3P48764 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC9A3P48764 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC9A3P48764 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC9A3P48764 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 TSPY12P-201ENST00000421279 868 ntBASIC16.09■□□□□ 0.17
SLC9A3P48764 BX664615.1-201ENST00000443558 458 ntBASIC16.09■□□□□ 0.17
SLC9A3P48764 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 AC010203.1-204ENST00000548782 407 ntBASIC16.09■□□□□ 0.17
SLC9A3P48764 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC9A3P48764 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC9A3P48764 AC004263.2-201ENST00000617183 678 ntBASIC16.09■□□□□ 0.17
SLC9A3P48764 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC9A3P48764 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC9A3P48764 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SLC9A3P48764 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms