Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.86□□□□□ -0.51
CXCL5P42830 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.86□□□□□ -0.51
CXCL5P42830 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
CXCL5P42830 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 KRT18P29-201ENST00000397031 1267 ntBASIC11.86□□□□□ -0.51
CXCL5P42830 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.86□□□□□ -0.51
CXCL5P42830 AC010653.2-201ENST00000623505 997 ntBASIC11.86□□□□□ -0.51
CXCL5P42830 AC092865.7-201ENST00000641832 219 ntBASIC11.86□□□□□ -0.51
CXCL5P42830 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC11.86□□□□□ -0.51
CXCL5P42830 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.86□□□□□ -0.51
CXCL5P42830 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.86□□□□□ -0.51
CXCL5P42830 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.86□□□□□ -0.51
CXCL5P42830 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.86□□□□□ -0.51
CXCL5P42830 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.86□□□□□ -0.51
CXCL5P42830 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CXCL5P42830 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CXCL5P42830 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CXCL5P42830 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
CXCL5P42830 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CXCL5P42830 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 PCDH8P1-201ENST00000428983 2773 ntBASIC11.85□□□□□ -0.51
CXCL5P42830 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CXCL5P42830 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.85□□□□□ -0.51
CXCL5P42830 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 AC100803.2-201ENST00000562459 1963 ntBASIC11.85□□□□□ -0.51
CXCL5P42830 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 PCDHA1-201ENST00000378133 2726 ntBASIC11.85□□□□□ -0.51
CXCL5P42830 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 HIST1H2APS4-201ENST00000362070 348 ntBASIC11.85□□□□□ -0.51
CXCL5P42830 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.85□□□□□ -0.51
CXCL5P42830 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
CXCL5P42830 REXO1L10P-201ENST00000615707 1290 ntBASIC11.85□□□□□ -0.51
CXCL5P42830 REXO1L12P-201ENST00000622156 912 ntBASIC11.85□□□□□ -0.51
CXCL5P42830 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CXCL5P42830 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC11.85□□□□□ -0.51
CXCL5P42830 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CXCL5P42830 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CXCL5P42830 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CXCL5P42830 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms