Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 PADI4-202ENST00000375453 841 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXD11P31277 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC106883.1-201ENST00000418805 562 ntBASIC18.89■□□□□ 0.61
HOXD11P31277 LINC00189-201ENST00000420364 989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXD11P31277 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD11P31277 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXD11P31277 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC010625.1-201ENST00000511296 403 ntBASIC18.89■□□□□ 0.61
HOXD11P31277 AC079866.1-201ENST00000534985 1220 ntBASIC18.89■□□□□ 0.61
HOXD11P31277 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD11P31277 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC083760.1-201ENST00000589621 670 ntBASIC18.89■□□□□ 0.61
HOXD11P31277 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXD11P31277 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXD11P31277 AP003485.2-201ENST00000623636 610 ntBASIC18.89■□□□□ 0.61
HOXD11P31277 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXD11P31277 AL450332.1-203ENST00000638742 1268 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXD11P31277 PSMC1P9-201ENST00000396338 1335 ntBASIC18.89■□□□□ 0.61
HOXD11P31277 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HOXD11P31277 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HOXD11P31277 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXD11P31277 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXD11P31277 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HOXD11P31277 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXD11P31277 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 TAC1-201ENST00000319273 1239 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 SNORD116-4-201ENST00000384733 96 ntBASIC18.88■□□□□ 0.61
HOXD11P31277 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HOXD11P31277 AP001596.1-203ENST00000421771 1078 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 TUBB8P6-201ENST00000436895 1288 ntBASIC18.88■□□□□ 0.61
HOXD11P31277 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC18.88■□□□□ 0.61
HOXD11P31277 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.88■□□□□ 0.61
HOXD11P31277 AL583856.1-201ENST00000454078 1101 ntBASIC18.88■□□□□ 0.61
HOXD11P31277 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.88■□□□□ 0.61
HOXD11P31277 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXD11P31277 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXD11P31277 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXD11P31277 AC007834.2-201ENST00000536310 343 ntBASIC18.88■□□□□ 0.61
HOXD11P31277 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 ETFRF1-210ENST00000556927 833 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 SNHG9-202ENST00000564014 471 ntBASIC18.88■□□□□ 0.61
HOXD11P31277 AC009119.1-203ENST00000565064 577 ntTSL 4 BASIC18.88■□□□□ 0.61
HOXD11P31277 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXD11P31277 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.88■□□□□ 0.61
HOXD11P31277 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXD11P31277 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXD11P31277 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXD11P31277 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
HOXD11P31277 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 AC233702.3-201ENST00000578656 1387 ntBASIC18.88■□□□□ 0.61
HOXD11P31277 AL356473.1-201ENST00000406203 1408 ntBASIC18.88■□□□□ 0.61
HOXD11P31277 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXD11P31277 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms