Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA13P31271 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HOXA13P31271 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA13P31271 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA13P31271 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXA13P31271 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HOXA13P31271 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA13P31271 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXA13P31271 ELK2BP-201ENST00000415014 1224 ntBASIC19.93■□□□□ 0.78
HOXA13P31271 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXA13P31271 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXA13P31271 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXA13P31271 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXA13P31271 POLD2P1-201ENST00000511220 997 ntBASIC19.93■□□□□ 0.78
HOXA13P31271 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXA13P31271 UNC93B6-202ENST00000528242 690 ntBASIC19.93■□□□□ 0.78
HOXA13P31271 AC145285.3-201ENST00000564603 959 ntBASIC19.93■□□□□ 0.78
HOXA13P31271 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXA13P31271 AC004706.3-202ENST00000621574 984 ntBASIC19.93■□□□□ 0.78
HOXA13P31271 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HOXA13P31271 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA13P31271 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
HOXA13P31271 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HOXA13P31271 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.93■□□□□ 0.78
HOXA13P31271 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.93■□□□□ 0.78
HOXA13P31271 NCF1C-201ENST00000438382 1427 ntBASIC19.93■□□□□ 0.78
HOXA13P31271 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HOXA13P31271 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HOXA13P31271 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA13P31271 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
HOXA13P31271 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HOXA13P31271 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA13P31271 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXA13P31271 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXA13P31271 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXA13P31271 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.92■□□□□ 0.78
HOXA13P31271 AC034105.1-201ENST00000563488 319 ntBASIC19.92■□□□□ 0.78
HOXA13P31271 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXA13P31271 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXA13P31271 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA13P31271 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA13P31271 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 ZNF259P1-201ENST00000407656 1365 ntBASIC19.92■□□□□ 0.78
HOXA13P31271 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
HOXA13P31271 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA13P31271 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXA13P31271 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HOXA13P31271 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXA13P31271 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HOXA13P31271 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXA13P31271 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HOXA13P31271 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HOXA13P31271 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXA13P31271 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXA13P31271 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 PMS2P1-201ENST00000431037 1228 ntBASIC19.91■□□□□ 0.78
HOXA13P31271 SLC25A6P5-201ENST00000435663 894 ntBASIC19.91■□□□□ 0.78
HOXA13P31271 AC136632.2-201ENST00000512891 861 ntBASIC19.91■□□□□ 0.78
HOXA13P31271 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HOXA13P31271 Z83851.2-201ENST00000609564 659 ntBASIC19.91■□□□□ 0.78
HOXA13P31271 MIR1199-201ENST00000621445 119 ntBASIC19.91■□□□□ 0.78
HOXA13P31271 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
HOXA13P31271 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXA13P31271 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HOXA13P31271 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXA13P31271 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXA13P31271 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXA13P31271 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXA13P31271 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HOXA13P31271 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXA13P31271 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
HOXA13P31271 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXA13P31271 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HOXA13P31271 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXA13P31271 KRT18P58-201ENST00000527480 1120 ntBASIC19.9■□□□□ 0.78
HOXA13P31271 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms