Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 AC096633.1-201ENST00000422446 749 ntBASIC16.63■□□□□ 0.25
PTPN6P29350 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN6P29350 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN6P29350 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN6P29350 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN6P29350 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.63■□□□□ 0.25
PTPN6P29350 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTPN6P29350 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PTPN6P29350 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN6P29350 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN6P29350 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PTPN6P29350 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PTPN6P29350 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PTPN6P29350 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTPN6P29350 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.63■□□□□ 0.25
PTPN6P29350 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTPN6P29350 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PTPN6P29350 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN6P29350 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTPN6P29350 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PTPN6P29350 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PTPN6P29350 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN6P29350 MTCL1P1-201ENST00000446207 792 ntBASIC16.62■□□□□ 0.25
PTPN6P29350 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN6P29350 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 AC005332.3-201ENST00000589904 676 ntBASIC16.62■□□□□ 0.25
PTPN6P29350 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTPN6P29350 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN6P29350 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.62■□□□□ 0.25
PTPN6P29350 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN6P29350 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 AL353692.3-201ENST00000407031 1396 ntBASIC16.62■□□□□ 0.25
PTPN6P29350 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN6P29350 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.62■□□□□ 0.25
PTPN6P29350 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTPN6P29350 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN6P29350 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTPN6P29350 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 AL118508.1-201ENST00000613502 2345 ntBASIC16.61■□□□□ 0.25
PTPN6P29350 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN6P29350 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN6P29350 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN6P29350 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 TSPY22P-201ENST00000427496 604 ntBASIC16.61■□□□□ 0.25
PTPN6P29350 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN6P29350 KRT8P26-201ENST00000534154 1276 ntBASIC16.61■□□□□ 0.25
PTPN6P29350 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN6P29350 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.61■□□□□ 0.25
PTPN6P29350 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN6P29350 AL390719.2-201ENST00000606993 987 ntBASIC16.61■□□□□ 0.25
PTPN6P29350 AL121672.3-201ENST00000608644 468 ntBASIC16.61■□□□□ 0.25
PTPN6P29350 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN6P29350 AL139327.4-201ENST00000612362 153 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms