Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.11■□□□□ 0.01
CD40P25942 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CD40P25942 KRT18P27-201ENST00000427733 1299 ntBASIC15.11■□□□□ 0.01
CD40P25942 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.11■□□□□ 0.01
CD40P25942 KRT18P58-201ENST00000527480 1120 ntBASIC15.11■□□□□ 0.01
CD40P25942 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CD40P25942 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.11■□□□□ 0.01
CD40P25942 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.11■□□□□ 0.01
CD40P25942 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 AC145285.3-201ENST00000564603 959 ntBASIC15.11■□□□□ 0.01
CD40P25942 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.11■□□□□ 0.01
CD40P25942 AL356488.2-201ENST00000602755 427 ntBASIC15.11■□□□□ 0.01
CD40P25942 AL671883.3-201ENST00000603274 991 ntBASIC15.11■□□□□ 0.01
CD40P25942 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CD40P25942 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CD40P25942 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.11■□□□□ 0.01
CD40P25942 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD40P25942 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.11■□□□□ 0.01
CD40P25942 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.1■□□□□ 0.01
CD40P25942 AC104109.2-201ENST00000602919 1418 ntBASIC15.1■□□□□ 0.01
CD40P25942 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.1■□□□□ 0.01
CD40P25942 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CD40P25942 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 RNA5SP415-201ENST00000517246 115 ntBASIC15.1■□□□□ 0.01
CD40P25942 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.1■□□□□ 0.01
CD40P25942 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.1■□□□□ 0.01
CD40P25942 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.1■□□□□ 0.01
CD40P25942 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 PGM5P2-202ENST00000637225 1043 ntBASIC15.1■□□□□ 0.01
CD40P25942 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CD40P25942 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.1■□□□□ 0.01
CD40P25942 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.1■□□□□ 0.01
CD40P25942 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.1■□□□□ 0.01
CD40P25942 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CD40P25942 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CD40P25942 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.09■□□□□ 0.01
CD40P25942 REXO1L11P-201ENST00000620964 1927 ntBASIC15.09■□□□□ 0.01
CD40P25942 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.09■□□□□ 0.01
CD40P25942 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
CD40P25942 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CD40P25942 AC136632.2-201ENST00000512891 861 ntBASIC15.09■□□□□ 0.01
CD40P25942 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.09■□□□□ 0.01
CD40P25942 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.09■□□□□ 0.01
CD40P25942 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.09■□□□□ 0.01
CD40P25942 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CD40P25942 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.09■□□□□ 0.01
CD40P25942 Z83851.2-201ENST00000609564 659 ntBASIC15.09■□□□□ 0.01
CD40P25942 AC004706.3-202ENST00000621574 984 ntBASIC15.09■□□□□ 0.01
CD40P25942 AC117500.6-201ENST00000624871 588 ntBASIC15.09■□□□□ 0.01
CD40P25942 AC005593.1-201ENST00000624894 515 ntBASIC15.09■□□□□ 0.01
CD40P25942 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.09■□□□□ 0.01
CD40P25942 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms