Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN1P18031 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPN1P18031 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPN1P18031 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.55■□□□□ 0.56
PTPN1P18031 AL139327.4-201ENST00000612362 153 ntBASIC18.55■□□□□ 0.56
PTPN1P18031 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN1P18031 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN1P18031 PCDHB18P-201ENST00000524813 2368 ntBASIC18.55■□□□□ 0.56
PTPN1P18031 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PTPN1P18031 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN1P18031 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN1P18031 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN1P18031 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN1P18031 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN1P18031 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN1P18031 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PTPN1P18031 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTPN1P18031 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN1P18031 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN1P18031 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 HTR7P1-202ENST00000624664 4411 ntBASIC18.54■□□□□ 0.56
PTPN1P18031 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN1P18031 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPN1P18031 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PTPN1P18031 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.54■□□□□ 0.56
PTPN1P18031 AL049840.3-201ENST00000602669 611 ntBASIC18.54■□□□□ 0.56
PTPN1P18031 AC107918.4-202ENST00000641623 219 ntBASIC18.54■□□□□ 0.56
PTPN1P18031 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 FZD10-202ENST00000539839 3282 ntBASIC18.54■□□□□ 0.56
PTPN1P18031 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN1P18031 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN1P18031 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN1P18031 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PTPN1P18031 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPN1P18031 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN1P18031 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN1P18031 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.53■□□□□ 0.56
PTPN1P18031 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN1P18031 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
PTPN1P18031 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTPN1P18031 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
PTPN1P18031 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN1P18031 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PTPN1P18031 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PTPN1P18031 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PTPN1P18031 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.53■□□□□ 0.56
PTPN1P18031 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.53■□□□□ 0.56
PTPN1P18031 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PTPN1P18031 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PTPN1P18031 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
PTPN1P18031 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
PTPN1P18031 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN1P18031 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN1P18031 GNAS-203ENST00000306120 1878 ntBASIC18.52■□□□□ 0.56
PTPN1P18031 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN1P18031 AC068880.1-201ENST00000507289 2297 ntBASIC18.52■□□□□ 0.56
PTPN1P18031 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN1P18031 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN1P18031 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN1P18031 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PTPN1P18031 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN1P18031 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PTPN1P18031 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN1P18031 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.52■□□□□ 0.56
PTPN1P18031 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN1P18031 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN1P18031 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN1P18031 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms