Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 PTCHD3P3-201ENST00000403073 906 ntBASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 AC004832.2-201ENST00000426397 482 ntBASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 VN2R19P-201ENST00000442399 1052 ntBASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 DNAJB3-201ENST00000446806 729 ntBASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 MIR3687-2-201ENST00000577708 61 ntBASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 AL353135.1-201ENST00000606729 504 ntBASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 MIR3687-1-201ENST00000614492 61 ntBASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 AL805961.1-202ENST00000641562 540 ntBASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
IGHV4-38-2P0DP08 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 AC112482.1-201ENST00000492080 688 ntBASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 AC018845.2-201ENST00000568326 409 ntBASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 GPR89P-201ENST00000407924 1495 ntBASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-38-2P0DP08 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.1□□□□□ -0.15
IGHV4-38-2P0DP08 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms