Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 PCDHB17P-201ENST00000539533 2393 ntBASIC20.11■□□□□ 0.81
MBD3O95983 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD3O95983 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.11■□□□□ 0.81
MBD3O95983 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.11■□□□□ 0.81
MBD3O95983 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.11■□□□□ 0.81
MBD3O95983 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD3O95983 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.11■□□□□ 0.81
MBD3O95983 AC024243.1-201ENST00000609234 778 ntBASIC20.11■□□□□ 0.81
MBD3O95983 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
MBD3O95983 AL359736.2-201ENST00000621992 437 ntBASIC20.11■□□□□ 0.81
MBD3O95983 AC092865.7-201ENST00000641832 219 ntBASIC20.11■□□□□ 0.81
MBD3O95983 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.11■□□□□ 0.81
MBD3O95983 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD3O95983 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD3O95983 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.11■□□□□ 0.81
MBD3O95983 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.11■□□□□ 0.81
MBD3O95983 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MBD3O95983 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
MBD3O95983 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
MBD3O95983 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MBD3O95983 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD3O95983 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MBD3O95983 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 LINC02199-201ENST00000506655 2702 ntBASIC20.1■□□□□ 0.81
MBD3O95983 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.1■□□□□ 0.81
MBD3O95983 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 AC007663.1-201ENST00000438948 1240 ntBASIC20.1■□□□□ 0.81
MBD3O95983 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.1■□□□□ 0.81
MBD3O95983 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.1■□□□□ 0.81
MBD3O95983 AC116562.4-202ENST00000641738 218 ntBASIC20.1■□□□□ 0.81
MBD3O95983 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MBD3O95983 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.1■□□□□ 0.81
MBD3O95983 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MBD3O95983 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MBD3O95983 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MBD3O95983 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MBD3O95983 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD3O95983 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD3O95983 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
MBD3O95983 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.09■□□□□ 0.81
MBD3O95983 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.09■□□□□ 0.81
MBD3O95983 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MBD3O95983 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.09■□□□□ 0.81
MBD3O95983 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
MBD3O95983 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.08■□□□□ 0.81
MBD3O95983 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.08■□□□□ 0.81
MBD3O95983 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
MBD3O95983 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD3O95983 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.08■□□□□ 0.81
MBD3O95983 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
MBD3O95983 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MBD3O95983 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms