Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC016734.2-201ENST00000624325 1377 ntBASIC17.61■□□□□ 0.41
GPC4O75487 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GPC4O75487 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GPC4O75487 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
GPC4O75487 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GPC4O75487 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC4O75487 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 AC141586.5-201ENST00000624546 2050 ntBASIC17.6■□□□□ 0.41
GPC4O75487 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC4O75487 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
GPC4O75487 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 MTCL1P1-201ENST00000446207 792 ntBASIC17.6■□□□□ 0.41
GPC4O75487 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 AC112698.1-201ENST00000510299 916 ntBASIC17.6■□□□□ 0.41
GPC4O75487 GUSBP12-201ENST00000513727 720 ntBASIC17.6■□□□□ 0.41
GPC4O75487 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.6■□□□□ 0.41
GPC4O75487 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC4O75487 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.6■□□□□ 0.41
GPC4O75487 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.6■□□□□ 0.41
GPC4O75487 AC090616.6-201ENST00000582640 721 ntBASIC17.6■□□□□ 0.41
GPC4O75487 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GPC4O75487 AL121672.3-201ENST00000608644 468 ntBASIC17.6■□□□□ 0.41
GPC4O75487 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC4O75487 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.6■□□□□ 0.41
GPC4O75487 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 AC100803.2-201ENST00000562459 1963 ntBASIC17.6■□□□□ 0.41
GPC4O75487 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.6■□□□□ 0.41
GPC4O75487 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GPC4O75487 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GPC4O75487 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.59■□□□□ 0.41
GPC4O75487 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC4O75487 PCDHA12-202ENST00000613593 2588 ntBASIC17.59■□□□□ 0.41
GPC4O75487 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GPC4O75487 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GPC4O75487 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC4O75487 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.59■□□□□ 0.41
GPC4O75487 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GPC4O75487 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC4O75487 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC4O75487 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GPC4O75487 BX276092.5-203ENST00000456199 560 ntBASIC17.59■□□□□ 0.41
GPC4O75487 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.59■□□□□ 0.41
GPC4O75487 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.59■□□□□ 0.41
GPC4O75487 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GPC4O75487 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GPC4O75487 AL353801.3-201ENST00000609898 542 ntBASIC17.59■□□□□ 0.41
GPC4O75487 AC091076.1-201ENST00000610741 619 ntBASIC17.59■□□□□ 0.41
GPC4O75487 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC4O75487 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC4O75487 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GPC4O75487 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GPC4O75487 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GPC4O75487 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC4O75487 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.58■□□□□ 0.41
GPC4O75487 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.58■□□□□ 0.41
GPC4O75487 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.58■□□□□ 0.41
GPC4O75487 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.58■□□□□ 0.41
GPC4O75487 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC4O75487 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GPC4O75487 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.58■□□□□ 0.41
GPC4O75487 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC4O75487 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC4O75487 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GPC4O75487 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GPC4O75487 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.58■□□□□ 0.4
GPC4O75487 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GPC4O75487 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.58■□□□□ 0.4
GPC4O75487 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 AL592071.1-201ENST00000611956 408 ntBASIC17.58■□□□□ 0.4
GPC4O75487 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GPC4O75487 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.58■□□□□ 0.4
GPC4O75487 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.58■□□□□ 0.4
GPC4O75487 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms