Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.76■□□□□ 0.43
KDELR3O43731 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.76■□□□□ 0.43
KDELR3O43731 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.76■□□□□ 0.43
KDELR3O43731 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 AC148477.8-201ENST00000624298 468 ntBASIC17.76■□□□□ 0.43
KDELR3O43731 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.76■□□□□ 0.43
KDELR3O43731 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
KDELR3O43731 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.75■□□□□ 0.43
KDELR3O43731 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
KDELR3O43731 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KDELR3O43731 FDX1P1-201ENST00000449115 551 ntBASIC17.75■□□□□ 0.43
KDELR3O43731 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.75■□□□□ 0.43
KDELR3O43731 AL662844.1-201ENST00000546340 181 ntBASIC17.75■□□□□ 0.43
KDELR3O43731 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
KDELR3O43731 SLC25A6P4-201ENST00000586535 553 ntBASIC17.75■□□□□ 0.43
KDELR3O43731 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.75■□□□□ 0.43
KDELR3O43731 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.75■□□□□ 0.43
KDELR3O43731 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.75■□□□□ 0.43
KDELR3O43731 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KDELR3O43731 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
KDELR3O43731 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
KDELR3O43731 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.75■□□□□ 0.43
KDELR3O43731 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.75■□□□□ 0.43
KDELR3O43731 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
KDELR3O43731 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KDELR3O43731 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
KDELR3O43731 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 AL135999.2-201ENST00000622438 1686 ntBASIC17.74■□□□□ 0.43
KDELR3O43731 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
KDELR3O43731 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 HNRNPDP1-201ENST00000439535 754 ntBASIC17.74■□□□□ 0.43
KDELR3O43731 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.74■□□□□ 0.43
KDELR3O43731 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.74■□□□□ 0.43
KDELR3O43731 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.74■□□□□ 0.43
KDELR3O43731 AL589182.2-201ENST00000619332 1049 ntBASIC17.74■□□□□ 0.43
KDELR3O43731 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.74■□□□□ 0.43
KDELR3O43731 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.74■□□□□ 0.43
KDELR3O43731 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.74■□□□□ 0.43
KDELR3O43731 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.74■□□□□ 0.43
KDELR3O43731 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.74■□□□□ 0.43
KDELR3O43731 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KDELR3O43731 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
KDELR3O43731 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
KDELR3O43731 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KDELR3O43731 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KDELR3O43731 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.73■□□□□ 0.43
KDELR3O43731 AC097637.2-201ENST00000624096 1997 ntBASIC17.73■□□□□ 0.43
KDELR3O43731 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.73■□□□□ 0.43
KDELR3O43731 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.73■□□□□ 0.43
KDELR3O43731 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 RPS2P1-201ENST00000434010 821 ntBASIC17.73■□□□□ 0.43
KDELR3O43731 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
KDELR3O43731 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 OR7E14P-202ENST00000530490 1290 ntBASIC17.73■□□□□ 0.43
KDELR3O43731 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KDELR3O43731 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.73■□□□□ 0.43
KDELR3O43731 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.73■□□□□ 0.43
KDELR3O43731 AL773604.1-201ENST00000617417 272 ntBASIC17.73■□□□□ 0.43
KDELR3O43731 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms