Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 AP002414.4-201ENST00000589764 1148 ntBASIC18.2■□□□□ 0.5
SRRM3A6NNA2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.2■□□□□ 0.5
SRRM3A6NNA2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 NEK4P2-201ENST00000580004 1012 ntBASIC18.19■□□□□ 0.5
SRRM3A6NNA2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 AL355385.1-201ENST00000606123 409 ntBASIC18.19■□□□□ 0.5
SRRM3A6NNA2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SRRM3A6NNA2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 HLA-A-209ENST00000638375 975 ntBASIC18.18■□□□□ 0.5
SRRM3A6NNA2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 AL596257.1-201ENST00000641463 2694 ntBASIC18.18■□□□□ 0.5
SRRM3A6NNA2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 KRT8P41-201ENST00000533985 1514 ntBASIC18.18■□□□□ 0.5
SRRM3A6NNA2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SRRM3A6NNA2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.17■□□□□ 0.5
SRRM3A6NNA2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms