Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 EMBP1-201ENST00000458200 901 ntBASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DUTP2-201ENST00000519164 463 ntBASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NSUN5P1-202ENST00000421140 1535 ntBASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NSUN5P2-203ENST00000457352 1529 ntBASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NUS1P2-201ENST00000417358 873 ntBASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC246785.2-201ENST00000432512 513 ntBASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC113404.2-201ENST00000507884 177 ntBASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC012313.1-201ENST00000593393 3059 ntBASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AL355312.1-201ENST00000407115 2176 ntBASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 IGHV3-47-201ENST00000425060 335 ntBASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TCRBV4S1A1TA0A5B7 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms