Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAPPC1Q9Y5R8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 AC016396.2-201ENST00000562575 1417 ntBASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 KRT19P1-201ENST00000405746 1186 ntBASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 AC073210.2-201ENST00000430369 194 ntBASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 AC091305.1-201ENST00000479476 895 ntBASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 LINC01451-201ENST00000623792 534 ntBASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 RNF216P1-203ENST00000404404 2427 ntBASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAPPC1Q9Y5R8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 RPS2P52-201ENST00000469610 820 ntBASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
TRAPPC1Q9Y5R8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAPPC1Q9Y5R8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms