Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 TP73-AS1-210ENST00000637775 1455 ntBASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 RCN1P2-201ENST00000398357 915 ntBASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 AL591684.3-201ENST00000605187 298 ntBASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HRH3Q9Y5N1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 NOC2LP2-201ENST00000407594 1944 ntBASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AC012317.2-201ENST00000623305 2251 ntBASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AC007967.3-201ENST00000434308 558 ntBASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AC132008.2-207ENST00000454517 770 ntBASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AL671883.3-201ENST00000603274 991 ntBASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 KRT18P55-202ENST00000578578 1546 ntBASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AC008764.6-201ENST00000595909 2069 ntBASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.23■□□□□ 0.19
HRH3Q9Y5N1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
HRH3Q9Y5N1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms