Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGC4Q9Y5F7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 AC008608.2-201ENST00000606089 416 ntBASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGC4Q9Y5F7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGC4Q9Y5F7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PCDHGC4Q9Y5F7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGC4Q9Y5F7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGC4Q9Y5F7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGC4Q9Y5F7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDHGC4Q9Y5F7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AC004870.1-201ENST00000315132 882 ntBASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AL121894.2-201ENST00000602977 491 ntBASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AL355877.3-201ENST00000622820 899 ntBASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGC4Q9Y5F7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 RBM17P3-201ENST00000417687 1192 ntBASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 STK25P1-201ENST00000585406 838 ntBASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 LYSMD4-203ENST00000378904 2122 ntBASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 AC004817.3-201ENST00000602957 2129 ntBASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC4Q9Y5F7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms