Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 AC099336.1-202ENST00000602961 463 ntBASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 TP73-AS1-210ENST00000637775 1455 ntBASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 AC009053.2-201ENST00000563701 2365 ntBASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPARGC1AQ9UBK2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 AC010460.3-201ENST00000511359 1579 ntBASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 COX5BP2-201ENST00000392354 334 ntBASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 AC006116.8-202ENST00000587620 1550 ntBASIC18.3■□□□□ 0.52
PPARGC1AQ9UBK2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 BX276092.7-203ENST00000637198 1536 ntBASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 AC122714.2-201ENST00000502787 707 ntBASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 CLEC4GP1-201ENST00000596555 870 ntBASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 AC114341.1-201ENST00000618070 349 ntBASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PPARGC1AQ9UBK2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PPARGC1AQ9UBK2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms