Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 LINC01711-201ENST00000598340 967 ntBASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 AC139713.2-201ENST00000641328 2723 ntBASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 LETM1P2-201ENST00000597330 2178 ntBASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ECHDC1Q9NTX5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 AC073592.4-201ENST00000623827 446 ntBASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 AC079776.2-201ENST00000641154 1609 ntBASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 SIGLEC16-201ENST00000599858 1437 ntBASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ECHDC1Q9NTX5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 AC148477.5-201ENST00000625164 1645 ntBASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 AL355877.3-201ENST00000622820 899 ntBASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.34■■□□□ 1.01
ECHDC1Q9NTX5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 AL020989.1-201ENST00000422979 469 ntBASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 SAPCD2P3-201ENST00000455031 850 ntBASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 AF238378.1-201ENST00000526806 358 ntBASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 MTDHP3-201ENST00000594186 672 ntBASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ECHDC1Q9NTX5 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms