Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH9Q9HC56 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH9Q9HC56 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH9Q9HC56 AC016734.2-201ENST00000624325 1377 ntBASIC18.14■□□□□ 0.49
PCDH9Q9HC56 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH9Q9HC56 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH9Q9HC56 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH9Q9HC56 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH9Q9HC56 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 AC068472.1-201ENST00000474589 881 ntBASIC18.13■□□□□ 0.49
PCDH9Q9HC56 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 IGHV3-41-201ENST00000613121 348 ntBASIC18.13■□□□□ 0.49
PCDH9Q9HC56 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDH9Q9HC56 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 AC011676.5-201ENST00000624864 2660 ntBASIC18.12■□□□□ 0.49
PCDH9Q9HC56 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 CHCHD2P8-201ENST00000429873 447 ntBASIC18.12■□□□□ 0.49
PCDH9Q9HC56 TSSC2-201ENST00000450217 709 ntBASIC18.12■□□□□ 0.49
PCDH9Q9HC56 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 AL592071.1-201ENST00000611956 408 ntBASIC18.12■□□□□ 0.49
PCDH9Q9HC56 AC124864.1-201ENST00000623408 392 ntBASIC18.12■□□□□ 0.49
PCDH9Q9HC56 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 AC084018.2-201ENST00000613093 2607 ntBASIC18.12■□□□□ 0.49
PCDH9Q9HC56 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH9Q9HC56 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 MTCL1P1-201ENST00000446207 792 ntBASIC18.11■□□□□ 0.49
PCDH9Q9HC56 RN7SL606P-201ENST00000472779 293 ntBASIC18.11■□□□□ 0.49
PCDH9Q9HC56 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 AC069148.1-201ENST00000608741 768 ntBASIC18.11■□□□□ 0.49
PCDH9Q9HC56 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH9Q9HC56 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms