Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 LINC02084-201ENST00000606069 1096 ntBASIC20.78■□□□□ 0.92
NBPF3Q9H094 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF3Q9H094 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF3Q9H094 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF3Q9H094 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF3Q9H094 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF3Q9H094 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF3Q9H094 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF3Q9H094 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF3Q9H094 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF3Q9H094 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NBPF3Q9H094 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.77■□□□□ 0.92
NBPF3Q9H094 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.77■□□□□ 0.91
NBPF3Q9H094 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.77■□□□□ 0.91
NBPF3Q9H094 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.77■□□□□ 0.91
NBPF3Q9H094 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.76■□□□□ 0.91
NBPF3Q9H094 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.76■□□□□ 0.91
NBPF3Q9H094 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NBPF3Q9H094 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.76■□□□□ 0.91
NBPF3Q9H094 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.76■□□□□ 0.91
NBPF3Q9H094 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.76■□□□□ 0.91
NBPF3Q9H094 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 AC139887.3-201ENST00000568585 713 ntBASIC20.76■□□□□ 0.91
NBPF3Q9H094 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.76■□□□□ 0.91
NBPF3Q9H094 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 NKAPP1-205ENST00000585790 367 ntBASIC20.76■□□□□ 0.91
NBPF3Q9H094 AL355385.1-201ENST00000606123 409 ntBASIC20.76■□□□□ 0.91
NBPF3Q9H094 AL139327.4-201ENST00000612362 153 ntBASIC20.76■□□□□ 0.91
NBPF3Q9H094 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.76■□□□□ 0.91
NBPF3Q9H094 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NBPF3Q9H094 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.75■□□□□ 0.91
NBPF3Q9H094 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 AC073648.2-201ENST00000510116 352 ntBASIC20.75■□□□□ 0.91
NBPF3Q9H094 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NBPF3Q9H094 AL139424.1-201ENST00000607572 797 ntBASIC20.75■□□□□ 0.91
NBPF3Q9H094 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
NBPF3Q9H094 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms