Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 KRT18P23-201ENST00000435622 1283 ntBASIC16.14■□□□□ 0.17
COPS4Q9BT78 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 BX088651.1-201ENST00000540551 451 ntBASIC16.14■□□□□ 0.17
COPS4Q9BT78 AL023803.3-201ENST00000615559 522 ntBASIC16.14■□□□□ 0.17
COPS4Q9BT78 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 AC022898.2-201ENST00000616822 1312 ntBASIC16.14■□□□□ 0.17
COPS4Q9BT78 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COPS4Q9BT78 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COPS4Q9BT78 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.13■□□□□ 0.17
COPS4Q9BT78 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COPS4Q9BT78 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COPS4Q9BT78 AL603756.1-201ENST00000606511 2163 ntBASIC16.13■□□□□ 0.17
COPS4Q9BT78 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 HOXB1-202ENST00000577092 1414 ntBASIC16.12■□□□□ 0.17
COPS4Q9BT78 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 AL355075.4-201ENST00000554988 638 ntBASIC16.12■□□□□ 0.17
COPS4Q9BT78 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 CR769767.2-201ENST00000622735 460 ntBASIC16.12■□□□□ 0.17
COPS4Q9BT78 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COPS4Q9BT78 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COPS4Q9BT78 AL391005.1-201ENST00000623953 2435 ntBASIC16.11■□□□□ 0.17
COPS4Q9BT78 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms