Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 MYCLP1-201ENST00000372451 1075 ntBASIC15.57■□□□□ 0.08
APH1AQ96BI3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.57■□□□□ 0.08
APH1AQ96BI3 AP005117.1-201ENST00000584346 1413 ntBASIC15.57■□□□□ 0.08
APH1AQ96BI3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APH1AQ96BI3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 SCARNA2-201ENST00000458748 420 ntBASIC15.56■□□□□ 0.08
APH1AQ96BI3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 MTDHP3-201ENST00000594186 672 ntBASIC15.56■□□□□ 0.08
APH1AQ96BI3 AC019129.2-201ENST00000609837 1235 ntBASIC15.56■□□□□ 0.08
APH1AQ96BI3 AL355877.3-201ENST00000622820 899 ntBASIC15.56■□□□□ 0.08
APH1AQ96BI3 AD001527.2-201ENST00000622994 785 ntBASIC15.56■□□□□ 0.08
APH1AQ96BI3 LINC01451-201ENST00000623792 534 ntBASIC15.56■□□□□ 0.08
APH1AQ96BI3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.56■□□□□ 0.08
APH1AQ96BI3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
APH1AQ96BI3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 AL049757.1-201ENST00000616842 1596 ntBASIC15.55■□□□□ 0.08
APH1AQ96BI3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 AL353593.2-201ENST00000602529 1483 ntBASIC15.55■□□□□ 0.08
APH1AQ96BI3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 KRT8P10-201ENST00000450021 1447 ntBASIC15.55■□□□□ 0.08
APH1AQ96BI3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 AC005104.2-201ENST00000427818 678 ntBASIC15.55■□□□□ 0.08
APH1AQ96BI3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 AF238378.1-201ENST00000526806 358 ntBASIC15.55■□□□□ 0.08
APH1AQ96BI3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 AL121912.1-201ENST00000603683 238 ntBASIC15.55■□□□□ 0.08
APH1AQ96BI3 AC073592.5-201ENST00000624854 528 ntBASIC15.55■□□□□ 0.08
APH1AQ96BI3 AP000867.4-201ENST00000641616 219 ntBASIC15.55■□□□□ 0.08
APH1AQ96BI3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
APH1AQ96BI3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
APH1AQ96BI3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms