Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GCN1Q92616 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.11■□□□□ 0.01
GCN1Q92616 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GCN1Q92616 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GCN1Q92616 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GCN1Q92616 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GCN1Q92616 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GCN1Q92616 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GCN1Q92616 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GCN1Q92616 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
GCN1Q92616 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.11■□□□□ 0.01
GCN1Q92616 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.11■□□□□ 0.01
GCN1Q92616 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.11■□□□□ 0.01
GCN1Q92616 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.11■□□□□ 0.01
GCN1Q92616 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.11■□□□□ 0.01
GCN1Q92616 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.11■□□□□ 0.01
GCN1Q92616 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GCN1Q92616 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
GCN1Q92616 AC100803.2-201ENST00000562459 1963 ntBASIC15.11■□□□□ 0.01
GCN1Q92616 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GCN1Q92616 AC092667.1-201ENST00000434301 2586 ntBASIC15.11■□□□□ 0.01
GCN1Q92616 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GCN1Q92616 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
GCN1Q92616 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.1■□□□□ 0.01
GCN1Q92616 AC148477.9-201ENST00000623974 539 ntBASIC15.1■□□□□ 0.01
GCN1Q92616 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GCN1Q92616 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GCN1Q92616 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
GCN1Q92616 AC026310.3-201ENST00000625186 2373 ntBASIC15.1■□□□□ 0.01
GCN1Q92616 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GCN1Q92616 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.1■□□□□ 0.01
GCN1Q92616 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 AC098850.1-201ENST00000419919 790 ntBASIC15.1■□□□□ 0.01
GCN1Q92616 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.1■□□□□ 0.01
GCN1Q92616 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.1■□□□□ 0.01
GCN1Q92616 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.1■□□□□ 0.01
GCN1Q92616 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.1■□□□□ 0.01
GCN1Q92616 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.1■□□□□ 0.01
GCN1Q92616 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GCN1Q92616 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.1■□□□□ 0.01
GCN1Q92616 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.1■□□□□ 0.01
GCN1Q92616 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.1■□□□□ 0.01
GCN1Q92616 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.1■□□□□ 0.01
GCN1Q92616 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.1■□□□□ 0.01
GCN1Q92616 AC008267.7-201ENST00000624570 1194 ntBASIC15.1■□□□□ 0.01
GCN1Q92616 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
GCN1Q92616 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.09■□□□□ 0.01
GCN1Q92616 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.09■□□□□ 0.01
GCN1Q92616 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GCN1Q92616 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.09■□□□□ 0.01
GCN1Q92616 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.09■□□□□ 0.01
GCN1Q92616 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.09■□□□□ 0.01
GCN1Q92616 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.09■□□□□ 0.01
GCN1Q92616 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
GCN1Q92616 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
GCN1Q92616 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GCN1Q92616 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 AC099336.1-201ENST00000417053 1171 ntBASIC15.09■□□□□ 0.01
GCN1Q92616 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.09■□□□□ 0.01
GCN1Q92616 AC114501.2-201ENST00000439631 535 ntBASIC15.09■□□□□ 0.01
GCN1Q92616 AC114501.1-201ENST00000445949 172 ntBASIC15.09■□□□□ 0.01
GCN1Q92616 PFN1P12-201ENST00000455938 534 ntBASIC15.09■□□□□ 0.01
GCN1Q92616 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.09■□□□□ 0.01
GCN1Q92616 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.09■□□□□ 0.01
GCN1Q92616 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.09■□□□□ 0.01
GCN1Q92616 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.09■□□□□ 0.01
GCN1Q92616 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GCN1Q92616 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.09■□□□□ 0.01
GCN1Q92616 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GCN1Q92616 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
GCN1Q92616 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GCN1Q92616 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.08■□□□□ 0.01
GCN1Q92616 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GCN1Q92616 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms